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… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. … Margulis). The information was then used to predict the metabolic strategies applied by a common ancestor to all … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … a way for researchers to study the planet’s microbial diversity, much of which remains unknown and uncultured in …

… A collaborative team led by Hao Tan from the Sichuan Academy of … an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … The genome sequences and annotations are available on JGI’s fungal portal  MycoCosm . Based on these analyses, we …

… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … Data Analysis – Tips from Users page.  Q:  Is the metabolic study able to build a profile for a not very well … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …

… The JGI is excited to welcome six to the Facilities Integrating Collaborations for User Facilities (FICUS) program for … call aims to encourage innovative research exploiting a diversity of capabilities to generate datasets beyond what …

… New evidence shows anaerobic fungi can degrade the hardiest of plant components   … conducted RNA sequencing and alignment to the reference fungal  genome . The study’s pivotal NMR (nuclear magnetic … The authors acknowledge their funding sources: Office of Biological and …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics … Liu, O., Akiva, E., Eyles, T. H., Galm, U., Ganesh, S., Hendrix, S. … modeling, simulation and coarse-graining of biological complexity with NFsim. Nature Methods 8, 177–183 (2011).  …

… Understanding how a fundamental mechanism of evolution allows microbes to … of viruses that had in their genomes a surprising tool: a “diversity generating retroelement,” or DGR. The DGR could … surprisingly active. In viruses, DGRs appear to generate diversity quickly, allowing these viruses to target new …

… An improved genome assembly to support targeted tree breeding for the … researchers have unlocked new information on the structural diversity of eucalyptus. The 2014 genome, generated using a … pangenome to better understand the genetic structural diversity of the genus. Understanding all the gene variants …