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Machine learning methods were applied on sequenced fungal … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes …

The Facilities Integrating Collaborations for User Science (FICUS) …

Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are … expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE …

Uri Neri is a computational biologist who spends his days wrangling … messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our code would …

The Facilities Integrating Collaborations for User Science (FICUS) call …

Virophages are small viruses with double-stranded DNA genomes … increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By … they were able to identify 44,221 total virophage partial sequences, including over 28,000 unique MCP sequences.  …

Though visible to the naked eye, microscopy reveals unexpected … kind of discovery opens new questions about bacterial morphotypes that have never been studied before.” Characterizing … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …

Registration and Agenda Coming Soon!  Hosted by the DOE Joint … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the … Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access novel …

A collaborative team led by Hao Tan from the Sichuan Academy of … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome sequences and annotations are available on JGI’s fungal …

The Integrative Genomics Building (IGB) seen above is home to … 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed … culminated in a reference for the complex  sugarcane genome sequence. The JGI  partnered  with synchrotron user …

Research uncovers the genetic foundations that helped plants conquer land over 600 … Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which … plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm portal. … …

JGI researchers lend expertise to develop tools and data hub for NIH program. While the … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …