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A Shrubbier Version of Rubber
… one tree species: Hevea brasiliensis . It’s great at producing latex that becomes rubber, but it’s vulnerable to disease and climate shifts. So researchers are looking into a desert shrub that’s native to North America: … with our friends at the HudsonAlpha Institute for Biotechnology.       …
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The Mobilome in the Mire
… MGEs, that can move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into light, and opening up new options for …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed the pipelines for directed … to learn more about the program's areas of focus, major initiatives and more.  …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, making the data available for future research. Hear from Rekha …
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The Busy World of Deep Sea Eruptions
… St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how they’ve adapted to this extreme environment.   …
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JGI@25: Stories from Intern Alumni
… anniversary . Over the next few months, we’ll be revisiting a number of notable achievements that showcase our … challenges. Over the past 25 years, the JGI has hosted interns from a number of universities and organizations. … research and wet lab experiments, to computational modeling and virtual projects, hear intern alumni Candace Cole, …
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Webinar: Introducing the BioSANS capability
… The BioSANS instrument is at the Center for Structural Molecular Biology … the Biological Small-Angle Neutron Scattering (BioSANS) instrument when applying to the FY2022 EMSL-JGI FICUS call for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to … the largest class of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes Project, including … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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A User-Centered Approach to Accessing JGI Data
… common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural shift in data access. Users were previously limited to accessing … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial … more reusable, and more insightful, for the future of studying microbial communities.   …
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2025 Progress Report
… support users, advance foundational science and enable biotechnology discoveries. (Pictured from left to right: Peng … Mi Yan, Deanna Beatty)    Vision  Lead AI-driven genomic innovation to advance biotechnology. Mission  As a U.S. … by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, …
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JGI on the 2020 Highly Cited Researchers List
… those recognized by Clarivate Analytics as “true pioneers in their fields over the last decade, demonstrated by the … sequence of green millet ( Setaria viridis ) in  Nature Biotechnology.  The work also led researchers to identify a … tool to help researchers assess and improve the quality of metagenome-assembled viral genomes. The paper appeared in  …
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