Search

… the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head.  Dr. Fagnan is also … how the JGI supports the entire data life cycle through resources including the JGI portals, and our broader data ecosystem. … National Microbiome Data Collaborative: enabling microbiome science. Nat Rev Microbiol 18, 313–314 (2020). …

… Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 years ago, the  Genomes OnLine … freely available, and enabling large-scale comparative genomics analysis initiatives. GOLD not only curates …

… experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the next generation of … program at UC Berkeley. Sally Liao came in through the DOE  Science Undergraduate Laboratory Internship program, while … important to know who you're talking to and, like, know your audience and cater what you're saying to the audience, …

… program. The portfolio of research proposals integrates genomics with nanoscale science, all aimed at accelerating discoveries and … leading approved proposals with free access to their resources and capabilities to advance their DOE …

… genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can … recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed significant signs of recovery … The study was funded by Natural Sciences and Engineering Research Council of Canada (NSERC) …

… at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the … process carbon and nitrogen, paving the way for future plants and trees to grow. However, fire changes the microbes … New Mexico State University, the Environmental Molecular Sciences Laboratory and the U.S. Department of Energy (DOE) …

… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … Rumen microbes have the ability to break down hardy plant cell walls and therefore hold clues to how humans …

… this “ data tsunami ,” as Kathy Yelick of the Computing Sciences Area at Lawrence Berkeley National Laboratory … to create pipelines, tools and other standardized data resources that the global research community can access and use … at the JGI and Berkeley Lab were developing specific programs to handle this scale of data. Part 2: Souped Up …

… microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial … the genome analysis and Bioinformatics core at Integrated Genomics Inc. in Chicago, IL. He did his postdoctoral … on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel methods for enabling …

… bioeconomy, including, potentially, methane as an energy source.  Until recently, our understanding of these … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the entirety …

… omics methods to examine microbial chemical production. The Science Soil bacteria in the genus Streptomyces are nature's … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Berkeley Lab, screened … Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science …

… potential for AI-driven studies of energy metabolism. The Science Researchers produced nearly 10,000 new annotations … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Berkeley Lab, addressed this gap in … standardized structure of the dataset position it as a resource for AI-driven approaches to predicting fungal …