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… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and … BS in Biochemistry and Biological Chemistry, Nottingham University, UK PhD in Genomics, University of Cambridge, UK Postdoctoral training Wellcome Trust Sanger …

… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … comparative genomic analyses.   The Impact There are 900 species of eucalyptus. The trees are fast-growing plantation …

… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about how the JGI supports the …

… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … samples and test how many they thought would be necessary. Switchgrass has an enormous metabolome, and we wanted to …

… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … harbored fungal genomes, including a novel Leotiomycetes species and Coniochaeata lignaria , and both DNA and RNA …

… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … #3777 (to EFD). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, … BBTools is a suite of fast, multithreaded bioinformatics tools designed for …

… In honor of the JGI's 25th anniversary in 2022, we have … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … lines of sorghum to understand what genes exist across the species. Earlier pan-genomes for other plants, like the …

… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health … composition and functional potential varied across tree species and sites, reflecting ecological patterns shaped by … ) conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 …

… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at … at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …

… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to … organisms who all consume different compounds. Microbial species will vary in activity as well; at any given time, …

… In April 2020, we mark both the 50th celebration of Earth … If you know Joshua Tree, that’s an example of a yucca species. And the cool thing about yuccas is that there are … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… A preview of how large-scale single cell genomics complements metagenomics studies. The … community was similar across sequencing approaches, that species specific sets of single cells harbored mobile … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …