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… led the development of an integrated platform for tracking JGI's sequencing projects and data warehousing. This platform streamlines project … Management Systems (LIMS), bioinformatics, and genomics data management. He has worked at several renowned …

… gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … Collaboratory (SMC) has launched as an interactive public database for the research community. With more than 13 … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities … Genomics (formerly DNA Synthesis) call, and he noted the data had driven his lab’s focus on guide RNA library … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …

… Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … ecosystem,” said Salamov, one of Wint’s mentors and a data scientist at the JGI. Previous studies were conducted … the research question and applied it to such a large data set, but also went all the way through to convert her …

… Biotechnology Genome Sequencing Center and a member of the JGI Plant Program. Lovell was a senior author on this work … with resequencing of 1,984 cultivars and landraces, these data capture the diversity of this crop across geographic … for future analysis and discovery. “We're building the data sets that are needed to build the algorithms of the …

… JGI researchers demonstrate how their laboratory and data … advanced genomic capabilities, large-scale AI-ready data and professional expertise to support the global …

… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through … Tfaily of the University of Arizona. Her team aims to use data from an interdisciplinary field campaign taking place … drought and multi-isotope labeling experiment, and the data will allow them to better understand the impacts of …

… (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in an HR advisory role to Division/Area … Analyst, May 2015 –  present Joint Genome Institute (JGI) HR Partner, June 2017 – present Berkeley National …

… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … to link experimental evidence across species. Centralized databases with large-scale transcriptome projects such as … is an updateable resource. To demonstrate that, we included datasets from two species, one of which is sweet sorghum Rio …

… the User Support Analysis team to analyze plant microbiome data via programming languages like Python. The more … plants and extracting DNA. They also analyzed 16s amplicon data to determine microbiome composition. This gave them an … on to Dori – a computer cluster owned and operated by the JGI and Berkeley Lab – to launch a jupyter notebook running …

… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … nonpolar metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and … custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and identifying …

… genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … to high (596 genomes) complexity. The environmental datasets included metagenomic data from Crystal Geyser in Utah (work also done by the …