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… Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … focused on stable and accurate computational methods for reacting subsurface flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the …

… cycles, and possibly cold-temperature enzymes for biotechnological use. Summary Conditions such as extreme … understand how they’ve adapted to these conditions, information that could have biotechnological applications. The … Integrated Microbial Genomes & Microbiomes (IMG/M) platform. These data allowed researchers to define a haloarchaea …

… the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most … shotgun metagenomic sequencing and single-cell sequencing. For years, extracting single cells and then amplifying their DNA for genome sequencing was no easy task. The traditional way …

… with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed the pipelines for … BA in Biology, North Central College, Naperville, IL BS in … 590: 438-444. Mamidi, S et al. 2020. A genome resource for green millet Setaria viridis enables discovery of …

… successfully automated aspects of a commonly-used process for studying microbial communities, with results published … with potential applications in industry and biotechnology for the production of  clean energy . Summary Arbuscular … mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial relationships with over 80% of land …

… projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, modeling, and data integration. Dr. … in spectral alignment, molecular networking, chemoinformatics, and bioinformatics facilitates impactful …

… and Outreach Manager at the JGI. Through multi-platform stories and outreach efforts, the team aims to broaden awareness of and access to … partners, and collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive … user research, newly accepted proposals, and outreach efforts.  …

… also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant … arise when different ancestral species crossbreed before genome doubling. In allopolyploids, the set of … a subgenome. Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to …

… in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as … by Jeremy Schmutz of the JGI and the HudsonAlpha Institute for Biotechnology; Phil McClean of North Dakota State … Nature Genetics . “Common beans are a major societal crop for those with severely limited income,” McClean said. …

… surface of plants, is a comparatively understudied area of forest ecosystems as past studies have mainly focused on … both local conditions and the movement of microbes through forest canopies.  The Impact This work, enabled in part by … the capacity to metabolize the same chemicals conifers use for defending themselves, which has important implications …

… most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, scientists have shed … Nature Plants , was able to assess absolute time estimates for major colonization events. It was previously assumed, … just 0.2% of the ocean floor, these meadows are responsible for almost one-third of carbon sequestered in the ocean. In …

… 25-plus years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and organisms than ever before. In 2006, the JGI produced 33 billion base pairs of … to high-quality, assembled datasets from all of this information. The JGI aims to create pipelines, tools and other …