Search

… responses to salt stress in S cenedesmus obliquus UTEX393." Communications Biology 8, no. 1 (2025): 1632. Myers, … International Conference on eScience (eScience), pp. 141-149. IEEE, 2025. Baumgart, Leo A., Ji Eun Lee, Asaf Salamov, … gene regulation." Nature methods 18, no. 12 (2021): 1499-1505. Hasty, Jeff, Leo Alexander Baumgart, Scott Cookson, …

… JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, Bowen BP, … maize (Zea mays). Scientific Reports. 2021. doi:10.1038/s41598-020-79320-z 3. Louie KB, Kosina SM, Hu Y, Otani H, de …

… Biology Knowledgebase. Nature Biotechnology 36, 566–569 (2018). Sneddon, MW, Pontius, W, and Emonet, T. Stochastic … Academy of Sciences of the United States of America 109(3), 805–810 (2012).  Sneddon, MW, Faeder, JR, and Emonet, … Education …

… Virus Genome (MIUViG). Nature Biotechnology 37, 29–37. Berg et al., 2021. Host population diversity as a … standing virus-host interactions. The ISME Journal 15, 1569–1584. Nayfach et al., 2020. CheckV assesses the quality … metagenome-assembled viral genomes. Nature biotechnology 39, 578-585. Roux et al., 2019. Cryptic inoviruses revealed …

… diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which … deconstruction by anaerobic fungi.  Nature Microbiol. 8(4):596-610. Nelson et al (2022) Wildfire-dependent changes in … microbiome diversity and function.  Nature Microbiol. 7(9):1419-1430. Ye et al (2022) The role of zinc in the …

… hyphosphere of arbuscular mycorrhizal fungi. Microbiome 199 Needham, D.M. et al. 2019. A distinct lineage of giant viruses brings a rhodopsin … Education …

… dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of mobile … Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat … Education …

… and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. … the faculty of University of California, Berkeley in 1989, as a member of the Physics Department and in 2002 he … 2012 Cotton Biotechnology Award, National Cotton Council 2009 Friday Evening Lecturer, Marine Biological Laboratory 2000 …

… Scholarship, 2002 & 2004 Graduate Student Award, 59th Lindau Meeting of Nobel Laureates and Students in Lindau, Germany, 2009 … algae reveals iron economy management. PNAS  120(30):e2305495120. Pasquini M, Grosjean N, Hixson KK, Nicora CD, Yee EF, … for activation of methionine aminopeptidase. Cell Reps 39 (7), 110834. (Subject of News and Views Article in Nature …

… Leadership and Development Program Awardee 2005-2009: NIH K25 Mentored Career Development awardee 1998-2003: NSF Graduate research training fellowship in … using mass spectrometry imaging. Analytical chemistry, 89(11), 5818–5823. Baran, R., Brodie, E., Mayberry-Lewis, J., …

… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this … from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  Ensifer … Symbiosis with  Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et al. 2021. Persistence and plasticity in …

… catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. Schulz et al. (2020) Giant virus diversity and host … (“German Academic Exchange Service”) scholarship (2008-2009) VDI (“Association of German Engineers”) award for … Education …