Results
… plant gene regulation." Nature Plants 11, no. 8 (2025): 1514-1527. Lax, Carlos, Stephen J. Mondo, José F. Martínez, … microsporus." Nature Communications 16, no. 1 (2025): 3843. McCahill, Ian W., Logayn T. Abushal, Bahman Khahani, … sites of potential Novosphingobium aromaticivorans DSM12444 transcription factors." Microbiology Resource …
Learn more
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became … in maize (Zea mays). Scientific Reports. 2021. doi:10.1038/s41598-020-79320-z 3. Louie KB, Kosina SM, Hu Y, Otani H, de … Sciences and Chemical Engineering. DOI: 10.1016/b978-0-12-409547-2.14834-6 4. Roth MS, Gallaher SD, Westcott DJ, Iwai …
Learn more
… virome reveals diverse clades of bacteriophages. Cell 185, 4023–4037. Coclet et al., 2023. Virus diversity and activity is … virus-host interactions. The ISME Journal 15, 1569–1584. Nayfach et al., 2020. CheckV assesses the quality and … Education …
Learn more
… deconstruction by anaerobic fungi. Nature Microbiol. 8(4):596-610. Nelson et al (2022) Wildfire-dependent changes … microbiome diversity and function. Nature Microbiol. 7(9):1419-1430. Ye et al (2022) The role of zinc in the adaptive … World’s Most Influential Scientific Minds, 2014-2023 Lawrence Berkeley National Laboratory Director’s …
Learn more
… Serrano et al. 2024. Spatial co-transcriptomics reveals discrete stages of … active, membrane-bound organelles. Science 376,1453-1458 Nuccio et al 2022 . HT-SIP: a semi-automated stable … Education …
Learn more
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of … matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of mobile … reveals diverse clades of bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of …
Learn more
… 2022 – present Alumni Award, MCS, University of Florida, 2024 Congressional Recognition, Women’s Services Honoree, 2022 … Postdoctoral Award for Research Excellence, 2015 34th Annual Women’s Recognition Award for Science, 2020 NIH … 2002 – 2006 HCA Foundation Scholarship, 2002 & 2004 Graduate Student Award, 59th Lindau Meeting of Nobel …
Learn more
… 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab Director’s Award for Exceptional Achievement … computing and metabolite atlases. Metabolites, 5(3), 431–442. Yang, J., Rubel, O., Prabhat, Mahoney, M., & Bowen, B. …
Learn more
… Bowers et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in … in bacterial gene regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria …
Learn more
… Krinos et al. 2024. Time-series metagenomics reveals changing protistan … the interface of simple and complex life. Science . 376: 1453-1458 Nayfach et al. (2021) A genomic catalog of Earth’s … Education …
Learn more
