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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… from half of the United States. As  reported January 27, 2021 in  Nature , the team led by researchers at the … fellow in the Juenger lab and continues to work on the project from a lab at Michigan State University that is …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after … into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a … UC CORO participant, 2021 Member of the Networking and Information Technology …
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An Addiction Crucial to a Fungus’ Reproduction
… JGI team sequenced and annotated a host genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes project. As reported in the November 29, 2017 issue of Nature Communications , the team found … of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology … which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is … flowering plant gene regulation." Nature Plants 11, no. 8 (2025): 1514-1527. Lax, Carlos, Stephen J. Mondo, José F. …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior … served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development … no. iyac146 DOI: 10.1093/genetics/iyac146 Gordon, et. al. 2020 Gradual polyploid genome evolution revealed by a …
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Charting Progress toward Professional Goals
… researcher who serves as their mentor. By contributing to projects that will help them build skills and tools, they … results not being the most promising. Going into the project, like, I kind of knew that my projects were experimental and definitely wasn't. Of course, …
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Ben Bowen
… Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab Director’s Award for … T., Rübel, O., Keasling, J., Northen, T., & Bowen, B. (2017). OpenMSI Arrayed Analysis Toolkit: analyzing spatially …
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First Monoploid Reference Sequence of Sugarcane
… The JGI sequenced half of the 4,500 BACs sequenced for this project that were colinear to the gene-rich part of sorghum … as a reference. The final sugarcane sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with more … of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. …
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing … is organizing nearly a dozen hackathons around the world in 2019, only the JGI hackathon is particularly focused on … of six teams will be hosted at the Hackathon, with 1-2 mentors per team. Participants will be expected to have …
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New Research Sheds Light on Diversity in the Deep Sea
… Science Hydrothermal vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents … those plates separate, seawater seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming … funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and OCE-2049478 …
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MycoCosm Tutorial
… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with …
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