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… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … The more the better. We want to put at least a microgram of DNA in the tube so you’d need at least 2 micrograms in … scale, and we can also easily measure the 15N at the bulk level, if that helps at all.  6. Q:How would field …

… Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … science.  Dr. Sneddon is an accomplished leader in data, software, compute, and AI for large-scale genomics and lab … Prior to joining JGI in late 2025, he served as Director of Scientific Computing at Predicine, an NGS-based clinical …

… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … and analysis of their data at the time. Following the publication of their paper in 2011, Dr. Sekimoto from …

… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … The phyllosphere, which is known as the aerial surface of plants, is a comparatively understudied area of forest … forests and the atmosphere. The team learned that some bacterial families carry genes for degrading monoterpenes …

… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … metabolic network of symbiosis using genome-scale metabolic models ” Pedro Antonio Perez Ferrer : “I enjoyed meeting …

… Analysis of haloarchaeal metagenomes broadens understanding of … use. Summary Conditions such as extreme cold, high levels of salinity and the sheer distance from other parts … samples collected at four Rauer lakes to assess population level genomic variation. The genome and metagenome data are …

… Nottingham University, UK PhD in Genomics, University of Cambridge, UK Postdoctoral training Wellcome Trust Sanger … al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et … Price et al 2018. Mutant phenotypes for thousands of bacterial genes of unknown function. Nature 557:503-509. …

… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … is a superorganism: one being that is actually comprised of two (or more) participants. One is a fungus (usually … how lichen is able to survive drying out to a potato-chip level of crispiness, only to revive in mere seconds or …

… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited speakers shared how research infrastructure – DNA … range of diversity even within a virus group. For example, levels of amino acid are shown to be wildly divergent among …

… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … cell’s membrane. Two decades ago, a team discovered a group of viruses that had in their genomes a surprising tool: a … the doors to characterizing how DGRs work at the molecular level. Scientists might then harness them as molecular tools …

… The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … in archaea, fungi or bacteria. Certain similarities with bacterial counterparts suggest the viral versions of the … This work was supported by the Department of Energy (DOE) Office of Biological and Environmental …