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… annotation was developing a high quality node for cacao used for systemic orthology to enable use for both cacao functional biology and breeding.     … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …

… Simon Roux (Cross-field)  Jeremy Schmutz (Cross-field)  Susannah Tringe (Microbiology)  Tanja Woyke (Biology and Biochemistry)  Here’s a selection of studies these busy bees contributed to:  Giant bacteria visible to the … : Under the umbrella of the GEBA, the JGI is sequencing thousands of bacterial and archaeal genomes from diverse …

… leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental … to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments …

… years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for … Plant Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …

… training at UC Berkeley and work in the pharmaceutical industry. He holds joint appointments as Fungal and Algal … geomics and PhycoCosm portal. Dr. Grigoriev engaged thousands of researchers in genome projects and organized numerous genomics workshops. … Algal Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and …

… Biology Pathway Engineering group. His research focus includes engineering of non-model yeasts for production … microbe-microbe and plant-microbe interactions in various environments to improve crop yield, and developing a … startup, Bio Architecture Lab, Inc. (BAL), where he used systems and synthetic biology to discover novel …

… The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in … and soil from the Angelo Coast Range Reserve in California. Using DAS Tool on data from soil samples, researchers were … genomes with >90% completeness. These results, noted JGI User Programs Deputy Susannah Tringe , suggest that …

… discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public databases and … fungi produce and manage energy at the cellular level. Because the annotations are standardized and span the full … and data available through MycoCosm — a platform widely used across the research community — the work lowers …

… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial … chemical production. The Science Soil bacteria in the genus Streptomyces are nature's chemical factories. They hold … , scientists found that adding salt to the growth medium caused Streptomyces coelicolor to activate multiple chemical …

… the dry rot ( Serpula lacrymans ) is so destructive in houses. A study involving six brown rot fungi reveals the … towards breaking down plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the fungus has responded to manmade changes in its ecological …

… bacterial interactions with animals and plants, or cause metal corrosion in oil pipes. Scientists have tried to … require external illumination, making them difficult to use inside deep tissues. Additionally, all plants, many … need external illumination to produce a signal, making them useful in a wider range of environments. This new technology …

… sequences from six hypersaline lakes, researchers focused on understanding the genomic variation in haloarchaea … and possibly cold-temperature enzymes for biotechnological use. Summary Conditions such as extreme cold, high levels of … the DOE Joint Genome Institute, a DOE Office of Science User Facility, microbial ecologist Rick Cavicchioli and his …