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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental processes. The … ) conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE … Stories Behind the Science: Decoding the Genes of Unseen Communities …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … attempts at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) hosted a pitch event promoting fully-supported summer research collaborations through … Systems Biology Knowledgebase (KBase) Ian Blaby for the JGI DNA Synthesis Platform Ben Bowen and Katherine Louie for the …
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Validation of two ribosomal RNA removal methods for microbial metatranscriptomics
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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Expansion of the global RNA virome reveals diverse clades of bacteriophages
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … environmental challenges. Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and … On Jennifer Doudna's Nobel Prize …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program … Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … Systems group. Tringe’s research group focuses on the roles of microbial communities in wetland carbon cycling and …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … genetic traits of the viruses to better understand their roles and potential impacts. The work is supported by NIH …
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JGI announces 2025 Functional Genomics awardees
… Kathleen Scott, Tiffany Taylor, Setsuko Wakao and Benjamin Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from scientists who … call , we look for projects that will leverage the JGI's DNA synthesis and omics capabilities to enhance …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery … developed and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this …
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference genomes and thousands of resequenced sorghum … Nature . “We wanted to build a resource that demonstrates DNA sequence diversity, gene repertoire, and the phenotypic … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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