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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics … ) on PhycoCosm tree with several sequenced genomes. 2.  Q: How exactly EcoGroups are built? A: EcoGroups are … While are still working on finalizing the tree and related publication the tree is still in development and not …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley … to learn more about the program's areas of focus, major initiatives and more.  … BA/MS in Biophysics, Moscow Engineering Physics Institute, Moscow, Russia PhD in Molecular …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga into a powerful platform … precise gene targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an … supported for his work on  Auxenochlorella genome sequencing and assembly in Berkeley, in part, through the …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying … Genomic Technologies. oClick to learn more about the offerings and capabilities we offer JGI users to help advance … of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data Generation …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … these gaps of knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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A User-Centered Approach to Accessing JGI Data
… common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural shift … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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A Community Resource for Secondary Metabolite Researchers
… Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most living creatures for energy, growth and reproduction—most … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of … National Laboratory. Letters of Intent are due March 16, 2022 to freely access resources at multiple DOE user …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, … This study was supported by a PhD scholarship from the China Scholarship Council to L.Y. (number 201704910807), by a …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In … Sanger Institute and Cambridge University University in 2005, where he studied RNA editing and cancer genetics. Dr. … BS in Biochemistry and Biological Chemistry, Nottingham University, UK PhD in Genomics, University of …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas …
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