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Help from Citrus’ Bitter, Hardier Cousin
… genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for … never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  … published over the last half-dozen years, on the ancestral origins of  Citrus sinensis , the sweet orange.     …
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Soil virus offers insight into maintaining microorganisms
… portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Using 5,000 images of crystalized … is a contribution of the Scientific Focus Area “Phenotypic response of the soil microbiome to environmental …
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A Sorghum Pangenome Opens More Doors to Discovery
… sorghum varieties, a resource for breeders and researchers to harness the traits that let this biomass powerhouse … holds keys to drought and flood resilience, biomass production for fuels, and growth in poor soils. In addition to … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science … (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on … of Energy is overseeing the SPRUCE (Spruce and Peatland Responses Under Changing Environments) project, assessing …
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Team Science Reveals Important Protein in Poplar
… bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  identified a protein …   that appeared to be involved in   iron deficiency response, formation of secondary cell walls (biosynthesis), … Science Initiative (QPSI) at Brookhaven National Laboratory (BNL). The Fe deprivation RNA-seq (proposal:  …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the …
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Genetic and Functional Diversity Help Explain Pathogenic, Weakly Pathogenic, and Commensal Lifestyles in the Genus Xanthomonas
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The Surprising Structure of a Shrub Willow Sex Chromosome
… hermaphrodites, expressing both male and female gametes in one individual. But some, including shrub willow  Salix … strategy we are far more familiar with: differentiating into male and female sexes. For the first time, the sex … One shared gene stood out in particular: a cytokinin response regulator that was expanded in a palindrome and …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial chemical production. The Science Soil … machinery toward chemical production — a coordinated response that had never been mapped in this detail before.   …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing conditions. A … in its environment, this alga reveals a remarkable ability to adapt to stress and rapid environmental changes. … ecosystems. Researchers studied P. psychrophila’ s stress response by comparing how it responded to being moved to a …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San … Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and the JGI … Approach to Discovering Promoters Regulating Poplar Drought Response 7:27 PM Highlights from Genome of Miscanthus 7:45 …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in his backyard in … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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