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Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis group. He … Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  … in bacterial gene regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria …

… hallii . Nature Communications 9: 5213. Huang, P et al. 2017. Sparse panicle1 is required for inflorescence … Nature Plants 3:17054. Schmutz, J, & McClean P et al. 2014. A reference genome for common bean and genome-wide … sequence of the model plant Setaria. Nature Biotechnology 30: 555-561. The International Brachypodium Initiative. …

Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from … DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and the … of talks relevant to JGI science at PAG XXVII. On January 14, JGI Plant Program head Jeremy Schmutz and  KBase Co-PI …

… data from over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The Impact Secondary … the JGI, like IMG-ABC, and other academic efforts, SMC is already the most comprehensive BGC database available at 10X … of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. … SMC is the most comprehensive BGC database …

Data Analysis System in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …

… into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a … Computing, Networking, Storage and Analysis, 2018, pp. 717-730, doi: 10.1109/SC.2018.00060. Wood-Charlson, E.M., Anubhav, Auberry, D. …

AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based on their …