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Grasses use an alternatively wired bHLH transcription factor network to establish stomatal identity
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have … ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion … — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive …
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A Standardized Synthetic Eucalyptus Transcription Factor and Promoter Panel for Re-engineering Secondary Cell Wall Regulation in Biomass and Bioenergy Crops
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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects that address biological functions for biomanufacturing, critical minerals and materials, … For the CSP Large Scale call, a Letter of Intent (LOI) is … LOIs/proposals are approved will receive further instructions via email.   Human or animal disease-related work will …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing … decoded the genome of an oil-producing green alga, and demonstrated precise gene targeting in the genome in the … support from the Gordon and Betty Moore Foundation (to SSM) for the work on  A. symbiontica (9203). RJC was supported …
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Serendipita Fungi Modulate the Switchgrass Root Transcriptome to Circumvent Host Defenses and Establish a Symbiotic Relationship.
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JGI@25: From Life at the Extremes to Editing Genomes
… Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence Berkeley National … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … CA. Banfield’s observations of the CRISPRs in her microbial sequences piqued Doudna’s interest. As Doudna noted in her …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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A Community Resource for Secondary Metabolite Researchers
… compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a … over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The Impact Secondary metabolites … agriculture. This comprehensive public repository of BGC sequences that come pre-annotated using multiple commonly …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into … Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea … of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta …
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The Case for Conservation
… moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a … advances in sequencing technologies applied to the effort. The Impact Found on all continents, including …
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