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Graduate Students Get Thesis Research Opportunity at the JGI
… Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program awards … mission areas across the 6 Office of Science research programs. Among the recipients of the latest SCGSR award is … are developing cutting edge technologies to answer our most pressing problems. I’m very much looking forward to …
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Kjiersten Fagnan
… a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research Division. As a postdoc, her research focused on stable and accurate computational methods for reacting subsurface flows, and evolved into … the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head.  Dr. Fagnan is also …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … generate from carbon dioxide they take in. In this way, encouraging this symbiosis could improve the way soils store …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … these datasets, researchers made a pan-genome containing four  B. hybridum  genomes and many  B. distachyon genomes. …
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Better Crops With a Pointillist Approach to Plant Genomics
… In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and more. And … could help us grow better crops, with less impact on our planet. …
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Leo Baumgart
… and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing single-nuclei sequencing … plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through process automation and method …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … leader in data, software, compute, and AI for large-scale genomics and lab informatics. Prior to joining JGI in late … Berkeley National Laboratory. Mike earned his PhD in Computational Biology and Bioinformatics from Yale …
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Len Pennacchio
… and has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in … and capabilities we offer JGI users to help advance their science. … a vision for future technical JGI directions for DOE User science. … of Regents Working Group on “NIH Comparative Genomics Resource” 2021-  Co-Chair, “Advances in Genome Biology & …
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VISTA Region Viewer (RViewer)—a computational system for prioritizing genomic intervals for biomedical studies
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Brachypodium: A monocot grass model system for plant biology
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Webinar: Introducing the BioSANS capability
… Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … working to address some of the most pressing challenges of our time. For more information, please visit  …
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Six join FICUS program in 2026
… year 2026, in partnership with the Environmental Molecular Sciences Laboratory (EMSL) and other national user … molecular techniques. The FICUS program is designed to encourage and enable researchers to more easily integrate the … at Oak Ridge National Laboratory, the Advanced Photon Source at Argonne National Laboratory, and the National …
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