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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… Pictured from left: [Top row]: Romy Chakraborty, Dawn Chiniquy, Anne Glaesener, Steven Hallam, … Genome Institute (JGI) and the Molecular Foundry (TMF) for their collaborative user program. The portfolio of … accelerating discoveries and developing transformative bio-based technologies involving critical minerals and …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … cycle. All methanogenic archaea use one of three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the … the compounds. Although what compounds they make is still largely a mystery, anaerobic fungi clearly have unexpected …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows … dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using … has looked for DGRs in a broad range of publicly available datasets. They’ve discovered that DGRs are not only …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new … contiguity, meaning the genome is reconstructed in much larger and more complete segments. This allows for more … The work (proposal: 10.46936/10.25585/60008105, WIP proposal ID: 508017, …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve … a chemical and biological engineer at the University of California Santa Barbara. So plants don’t break down without a … To get to that point, industrial facilities will need large-scale approaches to processing plant biomass. Here, …
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DOE JGI Interns Share Their Summer Experiences
… This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, …
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Introducing New Members of the JGI User Executive Committee
… new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six … of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist … in access, analysis and sharing of JGI-generated data. She is also interested in reaching and engaging with …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … In 2009, researchers at the JGI and the Bigelow Laboratory for Ocean Sciences described a novel technique to access … and single cell genomics have afforded JGI users and the larger research community a means to access microbial …
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River microbiomes from around the world: Kelly Wrighton
… Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the research of … Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi from … early stages, so I can begin biological analysis of the data sooner than I anticipated.” In her message, Dumont …
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JGI Announces 2023 Community Science Program Awardees
… Congratulations to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. … their success. “ The CSP Annual Call is focused on large-scale genomic science projects relevant to the DOE’s …
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