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… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this gap. …

… research project are appropriately recognized and credited for their work, while also adhering to the authorship … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce … CRediT taxonomy categories. Users: Users are responsible for reviewing the journal's authorship policies and …

… sample processing and sequencing capabilities. The Genomic Technologies Group, which includes the Sequencing … automation — and further advancing sequence applications, single cell genomics, biodesign, and metabolomics capabilities.    … An assay used for profiling transcription factor binding sites across …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … The program provides high-quality, large-scale genomic data to advance microbial research that drives …

… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to … possess genomes and particle sizes that rival those of cellular organisms. Giant viruses challenge the traditional …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of …

… that – I want to say like lipid bilayer, you know, in the cell.  DAN: It depends on lifestyle. So there are lots of … think of bacteria. You think of bacteria as sort of these single celled organisms, kind of all over. But these kinds … you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in …

… One of the JGI’s key assets is our user community, comprising a broad range of researchers and … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … Each portal lists a contact, or you can reach out via the form on our website.   …

… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS call with EMSL begin with a Letter of … project motivation, experimental design, capabilities to be used and DOE mission relevance. LOIs allow the JGI and EMSL …