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Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

The program provides high-quality, large-scale genomic data to advance microbial research that drives … of bacteria and archaea in their natural environments using single cell approaches. This includes linking strain-level genetic …

We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in …

… that – I want to say like lipid bilayer, you know, in the cell.  DAN: It depends on lifestyle. So there are lots of … think of bacteria. You think of bacteria as sort of these single celled organisms, kind of all over. But these kinds … you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in …

The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … Accessing Resources at Multiple DOE User Facilities with a Single Proposal describes the resources available from the …

… percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than … Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a … based on feasibility and scientific merit.  Arizona Genomics Institute will produce HMW DNA needed for these …

I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … for example, in terms of the stereochemistry, such that single changes can lead to a particular high activity … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …