Publications
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Satou, Y. et al. (2008) Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations. Genome Biology. 10.1186/gb-2008-9-10-r152
Coyne et al. (2008) Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure. BMC Genomics. 10.1186/1471-2164-9-562
Bluhm et al. (2008) Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth. BMC Genomics. 10.1186/1471-2164-9-523
Kunin, V. et al. (2008) Millimeter‐scale genetic gradients and community‐level molecular convergence in a hypersaline microbial mat. Molecular Systems Biology. 10.1038/msb.2008.35
Wu et al. (2008) A simple, fast, and accurate method of phylogenomic inference. Genome Biology. 10.1186/gb-2008-9-10-r151
Markowitz, V. et al. (2007) The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions. Nucleic Acids Research. 10.1093/nar/gkm846
Torriani, S. F. F. et al. (2007) Intraspecific comparison and annotation of two complete mitochondrial genome sequences from the plant pathogenic fungus Mycosphaerella graminicola. Fungal Genetics and Biology. 10.1016/j.fgb.2007.12.005
Markowitz, V. et al. (2007) IMG/M: a data management and analysis system for metagenomes. Nucleic Acids Research. 10.1093/nar/gkm869
Liolios, K. et al. (2007) The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata. Nucleic Acids Research. 10.1093/nar/gkm884
Auger, S. et al. (2007) The Genetically Remote Pathogenic Strain NVH391-98 of the Bacillus cereus Group Is Representative of a Cluster of Thermophilic Strains▿ †. Applied and Environmental Microbiology. 10.1128/aem.02242-07
Rensing, S. et al. (2007) The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants. Science. 10.1126/science.1150646
Kunin, V. et al. (2007) A bacterial metapopulation adapts locally to phage predation despite global dispersal. Genome Research. 10.1101/gr.6835308