Publications
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Larroux, C. et al. (2008) Genesis and Expansion of Metazoan Transcription Factor Gene Classes. Molecular Biology and Evolution. 10.1093/molbev/msn047
Anderson, I. J. et al. (2008) Genome Sequence of Thermofilum pendens Reveals an Exceptional Loss of Biosynthetic Pathways without Genome Reduction▿ †. Journal of Bacteriology. 10.1128/jb.01949-07
Yin, T. et al. (2008) Genome structure and emerging evidence of an incipient sex chromosome in Populus. Genome Research. 10.1101/gr.7076308
King, N. et al. (2008) The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans. Nature. 10.1038/nature06617
Ralph, S. G. et al. (2008) Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding. BMC Genomics. 10.1186/1471-2164-9-57
Vallès, Y. et al. (2008) Group II Introns Break New Boundaries: Presence in a Bilaterian's Genome. PLOS ONE. 10.1371/journal.pone.0001488
Boore, J. L. et al. (2008) Beyond linear sequence comparisons: the use of genome-level characters for phylogenetic reconstruction. Philosophical Transactions of the Royal Society B Biological Sciences. 10.1098/rstb.2007.2234
Visel, A. et al. (2008) Ultraconservation identifies a small subset of extremely constrained developmental enhancers. Nature Genetics. 10.1038/ng.2007.55
Wickett, N. J. et al. (2008) Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura mirabilis. Molecular Biology and Evolution. 10.1093/molbev/msm267
Satou, Y. et al. (2008) Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations. Genome Biology. 10.1186/gb-2008-9-10-r152
Coyne et al. (2008) Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure. BMC Genomics. 10.1186/1471-2164-9-562
Bluhm et al. (2008) Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth. BMC Genomics. 10.1186/1471-2164-9-523