Publications
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Boore, J. L. et al. (2008) Beyond linear sequence comparisons: the use of genome-level characters for phylogenetic reconstruction. Philosophical Transactions of the Royal Society B Biological Sciences. 10.1098/rstb.2007.2234
Visel, A. et al. (2008) Ultraconservation identifies a small subset of extremely constrained developmental enhancers. Nature Genetics. 10.1038/ng.2007.55
Wickett, N. J. et al. (2008) Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura mirabilis. Molecular Biology and Evolution. 10.1093/molbev/msm267
Rodrigues, D. F. et al. (2008) Architecture of thermal adaptation in an Exiguobacterium sibiricum strain isolated from 3 million year old permafrost: A genome and transcriptome approach. BMC Genomics. 10.1186/1471-2164-9-547
Kunin, V. et al. (2008) Millimeter‐scale genetic gradients and community‐level molecular convergence in a hypersaline microbial mat. Molecular Systems Biology. 10.1038/msb.2008.35
Coyne et al. (2008) Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure. BMC Genomics. 10.1186/1471-2164-9-562
Satou, Y. et al. (2008) Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations. Genome Biology. 10.1186/gb-2008-9-10-r152
Bluhm et al. (2008) Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth. BMC Genomics. 10.1186/1471-2164-9-523
Wu et al. (2008) A simple, fast, and accurate method of phylogenomic inference. Genome Biology. 10.1186/gb-2008-9-10-r151
Riley, M. et al. (2008) Genomics of an extreme psychrophile, Psychromonas ingrahamii. BMC Genomics. 10.1186/1471-2164-9-210
Loh, Y. E. et al. (2008) Comparative analysis reveals signatures of differentiation amid genomic polymorphism in Lake Malawi cichlids. Genome Biology. 10.1186/gb-2008-9-7-r113
Markowitz, V. et al. (2007) IMG/M: a data management and analysis system for metagenomes. Nucleic Acids Research. 10.1093/nar/gkm869
