Publications

Lux, M. et al. (2016) acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data. BMC Bioinformatics. 10.1186/s12859-016-1397-7

Seppälä, S. et al. (2016) Mapping the membrane proteome of anaerobic gut fungi identifies a wealth of carbohydrate binding proteins and transporters. Microbial Cell Factories. 10.1186/s12934-016-0611-7

Mansueto, L. et al. (2016) Rice SNP-seek database update: new SNPs, indels, and queries. Nucleic Acids Research. 10.1093/nar/gkw1135

Hadjithomas, M. et al. (2016) IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes. Nucleic Acids Research. 10.1093/nar/gkw1103

Woo, H. et al. (2016) Near-Complete Genome Sequence of Thalassospira sp. Strain KO164 Isolated from a Lignin-Enriched Marine Sediment Microcosm. Microbiology Resource Announcements. 10.1128/genomea.01297-16

Wang, L. et al. (2016) Interactions among triphenyltin degradation, phospholipid synthesis and membrane characteristics of Bacillus thuringiensis in the presence of d-malic acid. Chemosphere. 10.1016/j.chemosphere.2016.10.140

Eudes et al. (2016) Exploiting members of the BAHD acyltransferase family to synthesize multiple hydroxycinnamate and benzoate conjugates in yeast. Microbial Cell Factories. 10.1186/s12934-016-0593-5

Schwander, T. et al. (2016) A synthetic pathway for the fixation of carbon dioxide in vitro. Science. 10.1126/science.aah5237

Gregory, A. C. et al. (2016) Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer. BMC Genomics. 10.1186/s12864-016-3286-x

Fochi, V. et al. (2016) Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas. New Phytologist. 10.1111/nph.14279

Rabe et al. (2016) A complete toolset for the study of Ustilago bromivora and Brachypodium sp. as a fungal-temperate grass pathosystem. eLife. 10.7554/elife.20522

Morales, J. et al. (2016) Development of a toolbox to dissect host-endosymbiont interactions and protein trafficking in the trypanosomatid Angomonas deanei. BMC Ecology and Evolution. 10.1186/s12862-016-0820-z