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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the … between all systems to maximize the impact of user research. The crucial elements are  proposal Award DOI(s), …

… genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM … of collaboration as well– was the integration of the RODEO algorithm by the group of Doug Mitchell from Illinois . So … really streamlined this whole process and made it so much faster than it was before. And then, well, this also became …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … really do anything else, just because it’s so cheap and fast and gives you so much more information to build on. So, …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … school . They can't commit 8, 10, 20 hours a week in the research lab, but they can commit to a semester of some …

… welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … saw this structure and how that would make the compound faster or something like that. So that was interesting to … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural products … BARONA-GOMEZ: OK so the EvoMining idea starts– it’s another algorithm that we have developed in the lab inspired by … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples … Facilities, is a legally binding contract.   All User researchers must have their home/employing institution sign a … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … technologies available at JGI and EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope …

… to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … It also utilizes advanced tools, including deep learning algorithms for gene annotation and protein folding models, … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …