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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …

The Community Science Program Large Scale Call is focused on genomic science projects … bioproducts production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and …

The IMG group owns and maintains integral components of JGI’s production … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … the deployment of computational workflows at peta- and exa- scales on multicore and many core architectures with the …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … cultured (gray; represented by an isolate genome). The next four strip charts indicate the environmental distribution, … might be everywhere, but only at a certain kind of coarse scale. DAN UDWARY: Yeah I think that’s right. That’s why I …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … applications. The program provides high-quality, large-scale genomic data to advance microbial research that drives … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, …

… in our bedroom together with us still while she’s still four months old. So it’s not a bad location for a little … know what they’re looking at, and hard to do on a large scale. And so– Marnix Medema: But in the end, I do feel that … pathway even if the genes are scrambled or altered in the chromosome. And so it becomes very difficult then to compare …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … interactions, over ecological and evolutionary time scales.The Metagenome Program combines large-scale, …

The Fungal & Algal Program explores the vast diversity of fungi and … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … and biogeochemistry. The program’s focus is on large-scale sequencing efforts that survey the vast phylogenetic …