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The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a collection of fungal genes … its major branches for users to characterize and propagate annotations across fungi. Myco-Ed Genomics Initiative   …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, etc. …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … Genomes & Microbiomes system ( IMG/M ) supports the annotation, comparative analysis, and distribution of …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … itself medicine, but the coding within the DNA codes for proteins that do the chemistry that put molecules together … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … For sure. I mean, that goes all the way back to NCBI, gene annotations and ontologies and things that — things have … with sequence similarity, either we just looked at which protein domains are in a gene cluster or we did sequence …

Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … and single cells. This effort uncovers novel genes, protein families, and pathways, enhancing our understanding …

Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … species.  Students collect fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. … is then sent to the JGI for genome sequencing, assembly and annotation. … The Mycocosm portal supports the annotation, …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, …

Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy and nutrient … … Metabolomics Offerings & Capabilities … Metabolite, Annotation and Gene Integration … Metabolomics Program in …

The Fungal & Algal Program Advisory Committees is chartered by … on the effective management and strategic objectives of the Program. The Committee serves as the Program's key external advisory panels and advocates of Program strategy, operations, and scientific relevance …