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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… cell is key to interrogating what genes do, how they work, and applying them to environmental and energy challenges. But not all scientists have the … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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Mapping the Earth’s Hidden Fungal Kingdom
… comparative genomics to decode millions of mystery genes and lay a future-ready foundation     Over the past billion years, fungi have spread quietly throughout our planet. From the deepest ocean floors to Antarctic valleys, … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … His research activity is focused on developing and implementing new technologies and methodologies that facilitate discovery of new secondary …
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Leo Baumgart
… 2018, following his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the Sequencing Technology Implementation Lead, … directs a multidisciplinary team responsible for piloting and operationalizing new genomic technologies, integrating …
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Katherine Louie
… joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics … Louie KB, Bowen BP, Olson HM, Purvine SO, Salamov A, et al. Anaerobic gut fungi are an untapped reservoir of natural …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. … Liu, O., Akiva, E., Eyles, T. H., Galm, U., Ganesh, S., Hendrix, S. L. B., Hwang, W. W., Kim, J. H., Neckelmann, A., Oteng-Pabi, S., …
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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the … Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how plants coordinate their gene expression with …
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Simon Roux
… viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, …
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Igor Grigoriev
… in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at …
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Trent Northen
… research programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. …
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Yasuo Yoshikuni
… to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This program has supported over 250 … more about the program's areas of focus, major initiatives and more.  … B.E. in Biological Science and Technology, Tokyo University of Science, Japan ( summa …
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Jeremy Schmutz
… the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … There he constructed the pipelines for directed finishing and co-led the team that finished the DOE human chromosomes … Jeremy Schmutz is the Plant Science Program Head at the JGI. Click to learn more …
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