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The Integrated Microbial Genome Resource of Analysis
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Natural Prodcast Episode 22: Alison Narayan
… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … declared a position on candy corn, which is perfect timing for an October podcast release. I hope that doesn’t get me … lots more to come. Maybe a bonus episode soon, too. Thanks for listening! And enjoy this conversation with Alison …
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Four Researchers Join JGI User Executive Committee
… State University, Jonathan Eisen of the University of California, Davis, and Michael Köpke of Lanzatech are the latest … Research (BER) missions. The JGI provides advanced genomic capabilities, large-scale AI-ready data and … Bik is a recipient of the Community Science Program (CSP) New Investigator call. Through membership in the UEC, …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and … and functionally explore viral genetic diversity.  In 2021, he was among those selected by the DOE Office of …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… the  2022 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or … as other year-end science discovery lists.  Updates to the Genomic Encyclopedia of Bacteria and Archaea : Under the … crop, as well as the discussion of key cassava genomic resources. Genome annotations for cassava are available on …
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Protocols
… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA … Tips for High Molecular Weight DNA extraction: …
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Natural Prodcast Episode 2: The Primer, Part 2
… so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this … metabolites, like sponges were a really common source for people to try to find new medicines for a long time. But … is usually one of the, you know, important environmental [resources] that plants need to grow. And so, yeah, so these …
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From Competition to Cooperation
… to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to establish … will assist researchers in moving toward functional genomics studies to learn more about the inner workings of … the framework of the Mycorrhizal Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems …
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JGI Mural
… The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic … to advancing the frontiers of environmental and energy genomics. Click on the images below to learn about the … science depicted. The two-story JGI mural was commissioned for the JGI’s 25th anniversary and done by Berkeley-based …
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A Community Resource for Secondary Metabolite Researchers
… compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a … (SMC) has launched as an interactive public database for the research community. With more than 13 million BGCs … biosynthetic gene clusters and secondary metabolites information from isolate and metagenome data.   The SMC ( …
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New and Improved: Eucalyptus Reference is Now Accessible
… improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new … This allows for more accurate and detailed comparative genomic analyses.   The Impact There are 900 species of … demand for eucalyptus in various industries, having genomic resources to develop molecular breeding tools has been …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… highest honors! Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial … is the interim director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for … Systems group. The award ceremony was held January 19, 2021. Learn more here in the Berkeley Lab story.   …
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