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… A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, … traits — height, biomass, hardiness to cold, etc. — to its genes. The undertaking took shovels, trucks — and more than …

… they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across … University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear from CSU San Marcos Professor Matt Escobar and UC Davis Associate Professor …

… Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and … the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP … efforts including systems-based approaches to unravel functional capabilities of plants, microbes and microbial …

… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become the current, and only, version of Phytozome accessible as an interactive website. Since May …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics … Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … science.  Dr. Sneddon is an accomplished leader in data, software, compute, and AI for large-scale genomics and lab …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … to experimental characterization and validation of the functional potential of these new lineages. …

… JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … The Prize also recognizes innovative and impactful analysis of microbiome data that has changed our … understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity.  In 2021, he …

… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and … & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a …

… on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… researchers have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, … move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into light, and …

… mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … is Dr. Yi Zhai, and I’m currently working on the effect of plant root exudates in the rhizosphere and microbiome. … to gain hands-on experience in molecular biology and plant functional genomics, because this work is essential for …