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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
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Three pairs of fungal Trametes strains isolated from distinct geographic origins show conserved genomic features and adaptive response to plant biomass
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… genome assembly, researchers offer a gapless end-to-end sequence of complete chromosomes. Auxenochlorella solves a …
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Tracking the Origins of Methane-Producing Microbes
… the microbes into small pools of cells that were then sequenced separately. From these samples, 111 …
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2024 Progress Report
… 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed … culminated in a reference for the complex  sugarcane genome sequence. The JGI  partnered  with synchrotron user … AI clustering algorithms to identify billions of protein sequences in metagenomes.  We continue to engage with our …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP …
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Viral Genomics Group
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Ec YcgR, within the Nano-lantern scaffold. They then mined sequence databases for homologous YcgR proteins and chose a … These 92 homologues were synthesized as codon optimized sequences and cloned into the Nano-lantern scaffold. Because …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… time. They also discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public … learning models that predict biological traits from DNA sequences. The study also confirmed that mitochondrial and … before this study. A statistical comparison of evolutionary trees built from mitochondrial and nuclear genomes showed …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …
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Ancient Algae Reveal Secrets of Plant Evolution
… Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which … plant resilience and productivity. The algal genomes sequences are available on the JGI’s  PhycoCosm portal. …
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The More the Merrier: Making the Case for Plant Pan-genomes
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