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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… this project may also have a practical relevance with helping to synthesize codon-optimized fungal genes for various … Last summer, Wint hosted a virtual four-day data carpentry workshop for the incoming 2021 JGI-UC Merced interns to help … interns and their mentors, and Wint is slated to lead the workshop again in the 2022 program. “I’m excited — I’m …
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JGI announces 2024 Functional Genomics awardees
… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that … to enhance understanding of gene and genome function. Tapping into these functions allows researchers to use them for … sequestration into sustainable biomaterials, and developing high-throughput methods to reveal metabolic pathways …
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Kjiersten Fagnan
… and Informatics department head.  Dr. Fagnan is also a co-PI for the National Microbiome Data Collaborative where she … unified data, and the ASCR Future Computing Methodologies workshops. In 2018, Dr. Fagnan was part of the Gordon Bell … Joubert et al., “Attacking the Opioid Epidemic: Determining the Epistatic and Pleiotropic …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… [Pictured from left to right are: [Above] Sara Branco, … of sequence. “We are thrilled to support this year’s CSP awardees as they embark on ambitious projects that span … research community. See below for the full list of 2026 CSP Large Scale Call recipients.    …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… microbes found in the oil plume from Deepwater Horizon oil spill led to a draft genome of the first deep-sea, oil-eating … how, from a single bacterial cell (seen here in a glass capillary), researchers sequenced and assembled the first … In 2017, the first New Lineages of Life (NeLLi) workshop was held, inviting the research community to …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… between three different principal investigators (PIs) harnessed JGI’s DNA synthesis capability to better … made via a tangled network of enzymes in plants. To better pinpoint the biosynthetic routes that produce terpenes, the … through the JGI DNA synthesis Community Science Program (CSP) Functional Genomics, the system allows scientists to …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… outsize role in cycling carbon and nutrients. These microscopic algae have managed to adapt to a unique set of … (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this collaboration, in 2017, they published … Algal Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . …
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Toward More Efficient Artificial Photosynthesis
… A team led by researchers at the Max Planck Institute (MPI) for Terrestrial Microbiology and the University of … was enabled in part through the Community Science Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome … (Berkeley Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of …
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JGI Announces 2025 New Investigator Portfolio
… Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian … Reich, Taniya RoyChowdhury and Mar Schmidt; [bottom] Cody Spiegel, James Tan, Emma Timmins-Schiffman, Andressa M. … Vischi, Jennifer Wisecaver, Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each …
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Natural Prodcast Episode 22: Alison Narayan
… be working out, so expect lots more to come. Maybe a bonus episode soon, too. Thanks for listening! And enjoy this … what it can do, and as chemists take those structures as inspirations to really start making other molecules related to … imagine this sentence comes across your desk. We’re developing this enzyme into a biocatalyst. Wasn’t it already a …
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Jeremy Schmutz
… Institute for Biotechnology. There he constructed the pipelines for directed finishing and co-led the team that … Institute and the collaborative projects funded through the CSP program. In addition to continuing to develop strategies … Chen, ZJ et al. 2020. Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton …
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JGI announces final round of 2022 Functional Genomics awardees
… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that …
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