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… applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  … precise genome editing. This means that scientists can modify gene expression, or delete genes, all with the rapid …

… as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American Academy of …

… of natural products. Proc Natl Acad Sci U S A. 118(18):e2019855118. Miyauchi et al (2020) Large-scale genome … traits. Nature Commun . 11(1):5125. Krizsán et al (2019) Transcriptomic atlas of mushroom development reveals … multicellularity in fungi. Proc Natl Acad Sci U S A. 116(15):7409-7418. Varga et al (2019) Megaphylogeny resolves …

… with advanced computer skills. During the summer of 2016,  DOE CGSF recipient Adam Riesselman of Harvard …

… the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE … to easily analyze viral genomes. This includes (i) classifying viruses into groups that can be compared across … for one field of research can be harnessed elsewhere. In a  2019 paper , the team applied computational methods and …

… system. We seek to expand beyond this model system by identifying phages and characterizing this multipartite phenomenon … 10.1038/s41396-020-0637-z 10.1038/s41477-024-01666-3 10.1016/j.celrep.2023.112676 … 10.1073/pnas.1907500116 10.1016/j.celrep.2019.04.054 10.1371/journal.pbio.2002860 … Postdocs: Margot …

… the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists … to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex communities, and …

JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and … Two-Phase Flow In Porous Media. Computational Geophysics 16(3). Dosanjh and S. Canon and J. DeSlippe and K. Fagnan …

… and to understand genome function in bacteria. Since 2016, he has been the lead of the User Support Analysis group. … regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria Release Plant-Available … genes of unknown function. Nature 557:503-509. Blow et al 2016. The Epigenomic Landscape of Prokaryotes. PLoS Genet …

Podar of Oak Ridge National Laboratory, who spoke at the 2019 New Lineages of Life (NeLLi) Meeting organized by the …