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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… — ‘What are they doing? How do they interact?’” said senior author Francis Martin, a Research Director Emeritus at the … Auer, a research engineer at INRAE and one of the first authors of this work.  To compare these trophic guilds, this … person at the Walnut Creek Marriott the week of September 30 – October 4, 2024.  …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… is especially rewarding. Wint is listed as the primary author on this publication and drove the entire project, … Patterns of Adaptive Evolution . Mol Biol Evol. 2022 Feb 3;39(2):msab372.doi: 10.1093/molbev/msab372.   Byline: …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… of microbiology at Ohio State University and senior author of this work.  North led the team that did this work. … Yoshikuni, head of the JGI’s DNA Synthesis program and a co-author on the paper. First a pathway, then a purified enzyme …
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Natural Prodcast Episode 4: Nancy Keller
… the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find earlier in the … on microbiomes they only talk about the bacteria. My god! 30% of our gut microbes are fungi. It’s really frustrating … And because the average fungal genome, I don’t know, is 30 megabases? Basidiomyetes might get to 50. Some of them go …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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The Expanding Universe of Methane Metabolisms in Archaea
… available metagenome data provided by the other study co-authors, and reconstructed from these 10 … the oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” Borrel and Gribaldo said in an … to Korarchaeota Drs. Luke McKay and William Inskeep are co-authors on the Borrel et al. study described above, and also …
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Natural Prodcast Episode 7: Ben Shen
… genome, the genome predicts they often can produce around 30 – more than 30 compounds. So, this was a complete surprise. So total, … different people have different numbers, but in general, an authoritative number for total number of natural products of …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… publicly available for the research community,” says lead author Serina Robinson, a postdoctoral fellow at the ETH …
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A Sorghum Pangenome Opens More Doors to Discovery
… and a member of the JGI Plant Program. Lovell was a senior author on this work with Nadia Shakoor, a research scientist … end uses and conditions.  The JGI’s sequencing produced the 33 reference genomes to build this pangenome, including a …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you succeed in finding your … is Challis et al, Chemistry and Biology, 2000, 211-224, 7:3 And so, you can then make predictions about NRPS’s that …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
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JGI Announces 2023 Community Science Program Awardees
… to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of …
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