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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
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Uri Neri
… messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our code would …
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FICUS Overview
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Expanding Virophage Diversity
… increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By … they were able to identify 44,221 total virophage partial sequences, including over 28,000 unique MCP sequences.  Further analysis led to the identification of …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from their soil samples. This … because, unlike bacteria, they often carry interrupting sequences, called introns. Introns are like having extra …
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FICUS
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… the most efficient at making proteins likely factors into why fungi have been so evolutionary and ecologically … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …
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2025 NeLLi Symposium
… metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the … Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access novel … cataloged and taxonomically classified to date. Under the “sequence to function’ umbrella, this symposium will further …
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2024 Progress Report
… 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed … culminated in a reference for the complex  sugarcane genome sequence. The JGI  partnered  with synchrotron user … AI clustering algorithms to identify billions of protein sequences in metagenomes.  We continue to engage with our …
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Trent Northen
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Applying Viral Genomics Expertise to Understanding the Human Virome
… collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …
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