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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… a powerful generative model  now available to the global research community able to not just analyze but also create DNA sequences mimicking an array of microbial life. By … is capable of discovering and modelling complex biological sequences such as biosynthetic gene cluster structures. …
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Evolution of a Fungal Gene Expression Regulator
… in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and … genomes, but is not well understood in fungi. A team of researchers reported on the largest analysis of 5mC … the role of transposons and 5mC in fungi could help researchers find ways to protect poplar and other crops being …
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
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Permanent Draft Genome Sequence of Desulfurococcus amylolyticus Strain Z-533T, a Peptide and Starch Degrader Isolated from Thermal Springs in the Kamchatka Peninsula and Kunashir Island, Russia
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High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Steven Wilson
… project and work order creation and management, automated sequence quality control and automation of …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… systems to optimize microbial bioreactors. This genomic research creates new opportunities for biomanufacturing, from … JGI’s call for large-scale projects at their word, the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… in New Mexico via leakage from a local dry-cleaner. Researchers  identified two bacteria,  Dehalococcoides … amount of what’s allowed in drinking water. However, in the deeper sites, toxic chemicals remain.  To identify the … and 2010. DNA was extracted from the samples that were sequenced by the U.S. Department of Energy (DOE) Joint …
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DAS Tool for Genome Reconstruction from Metagenomes
… JGI’s Emerging Technologies Opportunity Program (ETOP) , researchers have developed and improved upon a tool that combines existing DNA sequence binning algorithms, allowing them to reconstruct … isolating and characterizing entire microbial genomes from sequences generated from environmental samples. The work …
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A Collaboration to Improve Plant Genome Annotations Across Species
… As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work on the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than … Schmutz is the Plant Program Lead at the JGI. Sarah:  Why is a resource like this important to the field of plant …
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