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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
As warm-adapted microbes edge polewards, they’d oust … tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their … expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict …
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Uri Neri
Uri Neri is a computational biologist who spends his days wrangling … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our code would …
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FICUS Overview
The Facilities Integrating Collaborations for User Science … to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National User Facilities into …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences …
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FICUS
The Facilities Integrating Collaborations for User Science … for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … Successful applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE … for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH … viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …
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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants … 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes of four  Zygnematophyceae algae, which …
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