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MISIP: a data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence and experiment
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Assembly of Robust Bacterial Microcompartment Shells Using Building Blocks from an Organelle of Unknown Function
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. …
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Building a custom high-throughput platform at the Joint Genome Institute for DNA construct design and assembly-present and future challenges.
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome … from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … of the JGI is to provide the global research community with access to the most advanced integrative genome science …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale postdoctoral … where she presented work related to distributed data and workflow management. Dr. Fagnan is also a co-PI for the …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with episode 13 of National Prodcast. This continues our … secondary metabolism which could– I mean, we all know, from experience, that when you have a culture, you grow it in one …
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab … By Friday, October 18, the production sequencing labs in Building 100 were silent. Twenty years after the JGI united … years ago. For JGIers, the moving process began in 2017 with annual one-day cleanups. During those days, they were …
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Training the Next Generation of Talent
Office of Science user facility, Keedrian Olmstead was back on campus at the University of California, Merced to start … individual projects at the DOE JGI that provide hands-on experience in cutting-edge genome research and apply … of a genome that contains transcribed instructions for building and maintaining cells through the use of …
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Coral life history and symbiosis: Functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata
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Graduate Students Get Thesis Research Opportunity at the JGI
… the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user … to work directly with Dr Susannah Tringe, gain first hand experience working in a national lab, and, with some hard … into their new shared home, the Integrative Genomics Building at Berkeley Lab. … The U.S. Department of Energy …
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A Mentor’s Perspective on Training the Next Generation
Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. In one way or another, …
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