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JGI@25: Stories from Intern Alumni
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … organizations. From field research and wet lab experiments, to computational modeling and virtual projects, hear intern …
Learn more
Webinar: Introducing the BioSANS capability
… Molecular Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how researchers can gain access to the … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Computationally Classifying Fungal Lifestyles
… learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … developed an algorithm that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, … phylogenetic tree for  Dothideomycetes . The data allowed the team to reclassify 25  Dothideomycetes species, …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data science efforts support users, advance … and enable biotechnology discoveries. (Pictured from left to right: Peng Wang, Sravanthi Tejomurthula, Mi Yan, Deanna Beatty)    Vision  Lead AI-driven genomic innovation to advance biotechnology. Mission  As a U.S. Department of …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of the chemicals they need to survive. To fill in their nutrient gaps, they must latch onto a larger host — often, a fellow archaeal microbe. Understanding how these hosts and …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) hosted a pitch event promoting … for current faculty. Applying faculty members may invite up to two student participants from the faculty member’s home … JGI Metabolomics Platform Blake Simmons for The BioManufactory Completed VFP applications are due on January 12, 2022. …
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JGI@25: Roots of a Mutualist Relationship
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. Having this first genome … fungus shifted the focus from looking at single organisms to applying a broader ecosystem perspective, involving more …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists … capability that is desirable in the microbiome field due to its high recovery of single-cell genomes. This is key to better understanding all the organisms that live in our …
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Mindfully Moving JGI
… in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 … various waste streams located throughout the buildings allowed JGI staff to mindfully declutter. Earlier this year, …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … genome for M. sinensis, and the associated genomic tools, allows Miscanthus to both inform and benefit from breeding …
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JGI Announces 2023 Community Science Program Awardees
… Congratulations to the proposers of the 19 proposals selected for the 2023 … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “We’re very excited to start working with this years’ crop of CSP recipients, … start October 1, 2022. See the full list of awardees below: …
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