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Genomic Identification and Characterization of Saxitoxin Producing Cyanobacteria in Western Lake Erie Harmful Algal Blooms
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Interns Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran Madichetty and mentors TBK … Pathogens Shayna Bennett and mentor Robert Bowers, Mobile Genetic Elements and CRISPR Spacers in the Conifer Needle … : So while here at the JGI, I’ve been studying mobile genetic elements and CRISPR spacers in the conifer needle …
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Mapping Heat Resistance in Yeasts
… proof-of-concept study, researchers demonstrated that a new genetic mapping strategy called RH-Seq can identify genes that promote heat resistance in the brewer’s/baker’s … tests to find associations between genotype – an organism’s genetic makeup – and phenotype – an organism’s physical …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… an enzyme system that was previously only understood at a genetic level. Functional and structural experiments showed … convertible to ethylene, he began looking into the genetic foundations of what would become the MAR enzyme .  … North and his team set themselves up to move from that gene identification into mechanistic understanding. They …
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A User-Centered Approach to Accessing JGI Data
… limited to accessing data sets within groups, such as plants (via Phytozome) or fungi ( MycoCosm ). “We have made … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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JGI announces 2024 Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions …
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Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation
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Updating algal evolutionary relationships through plastid genome sequencing: did alveolate plastids emerge through endosymbiosis of an ochrophyte?
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… thought. Instead, it turns out this fern has been co-opting genes from bacteria. Schmutz was also involved in  a … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… and a co-first author on the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. “I … As Volland noted, “The bacteria contain three times more genes than most bacteria and hundreds of thousands of genome … which is a process analogous to photosynthesis for plants.” Another outstanding question is whether the new …
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Soil virus offers insight into maintaining microorganisms
… soil health. Summary Soil viruses are a reservoir of genetic diversity and capable of transferring genes from one host microbe to another, which can have a … scientists can shed light on hidden components, including genes called auxiliary metabolic genes (AMGs) that have …
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Game On: High School Students Drive Everglades Metagenomics Study
… sampling in the Florida Everglades to help train the next generation of scientists. She shares her thoughts about the … analysis.  The class had to sift through over 55 billion genes and 16 trillion DNA bases of data, to figure out what … to look at the predominant taxa and the abundance of genes involved in environmentally significant metabolic …
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