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Calculating the Costs of Multiple Switchgrass Gene Copies
… Scientists have discovered that the candidate bioenergy feedstock switchgrass has adapted … of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … More genome copies in switchgrass leads to increased climate flexibility …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address … soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in … candidates for genetic engineering. Our hope is that the community at large will follow that up,” Serrano said.  This …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with … language processing techniques to categorize genetic information. Learn more about their work here in a series of … summer. The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring students to embark on a …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 … at the JGI’s history, from its beginnings in the sequencing for the Human Genome Project out to the future of the … manager in 2006 when the JGI transitioned from human to microbial genetics. Drell held the role until he retired in …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the … californiae , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about how the JGI … The Chief Informatics Officer provides advice and strategic direction for …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version … of 250 plant genomes and has been under active development for over 5 years, provides users with the genome browsers, …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple … to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently … genomes of symbiotic species available: 73 saprotrophs and 62 mycorrhizal species. The 62 mycorrhizal species include 29 …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… The  National Ecological Observatory Network (NEON) is a network … Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … more about BioSANS. Letters of Intent are due March 17, 2021 for the FICUS proposal call. Q&A from the Webinar: …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at the JGI … next generation of STEM professionals. Students can apply for internships and work onsite with an experienced …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… P. psychrophila genes drive resilience when salinity fluctuates. The … manage the growth, yield and climate resilience of algae — for potential use as biomass or in biomass conversion to … dead cells recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed …
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The Case for Conservation
… How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The fire … advances in sequencing technologies applied to the effort. The Impact Found on all continents, including … This work was supported by NSF DEB-1541005 and start-up funds from UF …
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