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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… increments.  At the JGI, a typical proposal is active for 3 years with the possibility for extension. Fungal genomes, for instance, can take up to a year or more to complete. Having that optional 12-month wait … APS, BioSANS typically has an acceptance rate of 12 to 15%, mainly due to resource limitations with our partner …
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Nigel Mouncey
… Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of managerial experience from almost 20 years in the Industrial Biotechnology private sector, as … 2016 World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American Academy of … Scientific Achievement , and was among the Lab’s 2015 Women @ the Lab honorees. Woyke is the second JGI …
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Webinar: MycoCosm Tutorial
… statistics across genomes (see video on comparative tools) 5.  Q: Is there any programmatic access to the portal? Or … A: Absolutely! 12.  Q: Is it possible to use the Browse page tool to compare your own data with the JGI database? A: … non-filtered? A: Filtering is an automated attempt to identify the best representative gene model per locus, based on …
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Natural Prodcast Episode 2: The Primer, Part 2
… We are still in – not an early stage. I think we can identify most secondary metabolism pathways now, but there’s still … it’s been a little bit difficult sometimes to identify secondary metabolism, just because it is similar to … from 1940 to 2000. As you can see, from the 1940s, into the 50s into the 60s, there was a huge growth – a huge explosion …
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Frederik Schulz
… the interface of simple and complex life. Science . 376: 1453-1458 Nayfach et al. (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. Schulz et al. (2020) Giant virus diversity and host … Senior Editor, ISME Journal LBNL LDRD (Soil Protists) FY2022 LBNL LDRD (Viral Variant Surveillance) FY2021 …
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A User-Centered Approach to Accessing JGI Data
… JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only accessible through the plant portal  … Data Restriction Policy requires that users know about the FY Funding Year, and the publication status in addition to the …
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JGI announces 2025 Functional Genomics awardees
… Tiffany Taylor, Setsuko Wakao and Benjamin Woolston. ] Each year, the JGI accepts proposals for state-of-the-art … applications in support of advancing the bioeconomy. This year's project goals range from engineering drought-tolerant … Below find a list of the 11 researchers accepted for 2025.  Proposals are accepted year-round ; the next deadline is …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… “Being a JGI-UC Merced Intern during the summer of my first year as a Ph.D. student significantly, and positively, … UC Merced graduate students who participated in the Summer 2015 research experience at the JGI as part of an education …
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JGI Announces 2025 New Investigator Portfolio
… Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel research projects from PIs … a list of researchers whose proposals were accepted for 2025. Utilizing the JGI’s resources, these researchers will … alpine soils to tropical glaciers.  Proposals are accepted year-round for this ongoing call; the next deadline for …
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Partnerships: Adopt-A-Genome
… and publicly available datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes … care center in Finland. Microbiol Resour Announc 0:e00891-25. https://doi.org/10.1128/mra.00891-25 . B. Christenson, I. … R. Seshadri & N. Jue. Whole genome sequence of the denitrifying thermophile Geobacillus thermodenitrificans subsp. …
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A More Intuitive Phytozome Interface
… genomes and has been under active development for over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces … restoration. They include Jalview (for viewing and modifying multiple sequence alignments). Variation view on …
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