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Work With the JGI! Tips for a Winning CSP Proposal
The JGI’s Community Science Program gives researchers access to all kinds of sequencing, ‘omics and bioinformatics capabilities — and it’s open to … tips from Tanja Woyke, who runs user programs at the JGI, and project manager Miranda Harmon-Smith, who helps …
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User Advisory Committees
… the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in this Code of Conduct. … The UEC represents the JGI user community and is responsible for providing input …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance …
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An Automated Tool for Assessing Virus Data Quality
… uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … to this point, there has been a lack of fast and accurate tools for researchers to assess the quality of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic … Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and omics capabilities to enhance …
Learn more
Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … restricted niche. And they do need broad host-range genetic tools so it’s more complicated than working with something … like E. coli , and then being able to look using the metabolomics capabilities also at JGI — it’s really cool that it’s …
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Whole-Genome rVISTA: a tool to determine enrichment of transcription factor binding sites in gene promoters from transcriptomic data
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JGI at the AGU Fall Meeting
Colorado State University: “Putting microorganisms on the map: continental-scale context for thousands of newly … Poster Hall D-F poster B45O-1813  : Maggie Bowman, PNNL: “EMSL’s 1000 Soils Project: core collection strategy and data …
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Natural Prodcast Episode 7: Ben Shen
… think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … to the Primer episodes, then you heard me talk about JGI’s Earth Secondary Metabolome initiative, and our … DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a …
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Mapping N-Linked Glycosylation Sites in the Secretome and Whole Cells of Aspergillus niger Using Hydrazide Chemistry and Mass Spectrometry
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JGI Accepts 17 Proposals for Community Science Program
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … submitted. Many of the proposals focus on harnessing genomics to developing sustainable resources for biofuels and … the reference genome sequence for Eucalyptus grandis. Accessing recently burned soils in California and Colorado, …
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Dispatches From JGI Interns
Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and … from the 2021 cohort describe their deep dives into genomics, computational tools, and big data.  …
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