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… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering … ). “We have made a concerted effort to create a common set of ‘baseline metadata’ across the files that are submitted …

… campus. Organized every two years since 2018, the goal of this symposium is to bring together a “Viral Ecogenomics” … uncultivated viral diversity, understand the role of viruses in natural ecosystems, and functionally explore … be held on Nov. 18 in the Tilden room and open-air patio of the same building.  The symposium will include a mix of …

… their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further …     Mo Kaze, UC Merced JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and …

… Three stories of JGI-supported research, connected to nutrient cycles. … Martin and Lucas Auer discuss their work on communities of forest floor fungi. Allison Joy looks into seagrass …

… Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from scientists who … synthesis and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions … crops through transcriptional network mapping, developing microbial systems to convert renewable feedstocks into …

… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … But scientists have wondered exactly how the microbial community carries out its helpful metabolism: … authors think this might have to do with the differences in lifestyle: honey bees need ample sugar to make honey that …

… During the summer of 2021, 13 interns from UC Merced spent eight weeks working … hone science presentation skills, and participate in professional development enrichment activities. For some … Merced internship program was founded in 2014 with the goal of inspiring students to embark on a career in genomics and …

… for users requiring multiple omics methods to examine microbial chemical production. The Science Soil bacteria in … chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under … a blueprint that engineers can use to design more efficient microbial factories. Identifying specific genes, regulatory …

… technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of faculty and researchers describe a workforce development … in parallel. While KBase does not currently have all the tools for complete processing and analysis of fungal data, …

… a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE … Rambo’s work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and …

… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … The webinar featured  Trent Northen and Ben Bowen of the  JGI Metabolomics Program , along with Jenny … Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … Human Genome Project began in 1990 when the U.S. Department of Energy (DOE) partnered with the National Institutes of …