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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … child growth and development, as well as a vital economic player, as a cash crop for small farmers and a commercial … as a test model quite frequently for R&D in plant genomics, because it is an inbred dicot,” Schmutz explained, …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the … bacterial clades shared between honey bee and bumblebee gut microbiomes. Researchers found that pollen’s pectin and …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … their expertise in developing and managing public viral genomics resources such as analytical tools and data … maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The Program aims to better …
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Extracting the Secrets of Secondary Metabolites
… survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … the researchers used CRAGE-CRISPR for discovering active secondary metabolites and helping them identify and … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes in … MycoCosm portal. In 2018, he launched scale-up of algal geomics and PhycoCosm portal. Dr. Grigoriev engaged thousands …
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Special Initiatives & Programs
… The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards … ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … synthesis requests, the minimum is 100 kb, and for metabolomics, at least 22 samples are required. If your proposed …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The … grass that adroitly handles droughts, floods and poor soils. This is the first paper that describes sorghum’s … of Drought Response in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome …
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Draft Genome Sequence of Yokenella regensburgei Strain WCD67, Isolated from the Boxelder Bug
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Identifying the Microbial Cleanup Crew at a Superfund Site
… PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … bioremediate toxic substances has led to the development of cost-effective environmental cleanup strategies. Summary … to access the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led by researchers at two U.S. Department of Energy national user facilities – the DOE Joint Genome … in the development and biotechnology applications of various biomaterials. These efforts align with BER …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … in  Nature Plants  on July 15, researchers have developed multiplexed assays — experimental techniques that allow … Berkeley National Laboratory, is committed to advancing genomics in support of DOE Office of Science Biological and …
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