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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … genomes, researchers were able to carry out a broader analysis than had ever been done before to look at how … generated by the JGI more than a decade ago. Having these datasets will assist researchers in moving toward functional …
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The Case for Conservation
… How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The … genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single set of chromosomes, are available. The genome assemblies …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … with carbon dioxide capture and the generation of biomass, making Chlamydomonas (affectionately known as “Chlamy” … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … has been really crucial.  DAN: Yeah, yeah. The more data you generate, the more knowledge you can generate. So … This the second episode of Natural Prodcast, which continues a conversation from the …
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Crawling through time: Transition of snails to slugs dating back to the Paleozoic, based on mitochondrial phylogenomics
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … on every continent besides Europe and Antarctica. A  new analysis takes a  genomic look at Lentinula samples from … 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy award 0000238431 to D.H., the GENOBIOREF …
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The Big Deal About Short Plants
… Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … found that the green sulfur bacteria population spiked to 83%, only to dramatically fall to 1% in early spring and …
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VEGA Symposium
… – $250 Students & Postdocs – $200 Regular Rates (begin September 19, 2026) General & Berkeley Lab Attendee – $300 Students & Postdocs – $250   Hosted by the DOE Joint … campus. Organized every two years since 2018, the goal of this symposium is to bring together a “Viral Ecogenomics” …
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Steven Wilson
… Since 2018, Mr. Wilson has served as the Systems Engineering … and supporting applications that span the lifecycle of activities at JGI - proposal submission and review, … of microbial/metagenomic assemblies, portals that make data available to the public, and our institutional website. …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … to high (596 genomes) complexity. The environmental datasets included metagenomic data from Crystal Geyser in …
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually … hone science presentation skills, and participate in professional development enrichment activities. For some … Blurring the Line Between Plasmids and Phages … Evolution of the Mitochondria Internship …
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