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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only accessible … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we … niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … of flavin independent monooxygenases with the help of JGI’s DNA synthesis grant. And that having a whole panel of …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … mushroom has a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome …
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An Earth Month Look at Sustainability Efforts at the JGI
… Earth Month events throughout April. This year, a new group at the Lab, the Sustainable Garden Club, hosted a DIY Succulent Workshop and Plant Sale. All year, the JGI helps support finding solutions to clean energy and environmental challenges. And many JGIers work to connect those big goals with their everyday …
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User Support
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … of the University of Georgia, along with 100 of his colleagues in the comparative plant genomics community. The …
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JGI & KBase at PAG XXVII
… place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will … Stop by and chat with representatives from KBase and the JGI about collaborative science opportunities. Learn how to …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … make it a viable candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled the genomes of two …
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Natural Prodcast Episode 2: The Primer, Part 2
… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … why we are still sequencing lots of stuff, and why the JGI is a key driver in some of the science. ALISON: Very …
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Partnerships: Adopt-A-Genome
… a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the … of microbial genomes that have been sequenced by the JGI though not formally analyzed or published.  The purpose …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the following … How To Create an Annotated GenBank File There are several easy-to-use open source … GenBank files. ApE is an open source desktop application written by M. Wayne Davis or commercial options …
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JGI Workshops at PAG
… is rising. The purpose of this Workshop is to illustrate the expansion of this field and bring it to the … we will present current and ongoing developments at the JGI and KBase toward integrative biology and hear from … We will describe how to apply for a project with the JGI Community Science Program and how you can use the KBase …
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