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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … jointgeno.me/2024StrategicPlan .) This plan aligns the DOE Office of Science user facility with broader national … These kinds of data could open opportunities along multiple avenues, including agriculture, climate modeling, …
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2025 NeLLi Symposium
…   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of … Symposium will take place at The Marjorie Barrick Museum of Art at the University of Nevada, Las Vegas. The poster …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements … studies. The Science Researchers demonstrated the value of conducting large-scale single cell genomics by collecting … that species specific sets of single cells harbored mobile genetic elements that were missed within paired metagenome …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … was published online June 8, 2014 in the journal Nature Genetics . “Common beans are a major societal crop for those …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … Science Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi … the Women in STEM campus organization and is involved with multiple outreach programs promoting the advancement of …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey at Duke University and … Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI announces 2025 Functional Genomics awardees
… Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from scientists who … synthesis and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions …
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Soil virus offers insight into maintaining microorganisms
… The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … soil health. Summary Soil viruses are a reservoir of genetic diversity and capable of transferring genes from one … This work was supported by the Department of Energy (DOE) Office of Biological and Environmental …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer … here.” Mentor: Lorenzo Aureli Project: “ Exploring the epigenetic basis of pathogenicity in bacteria” Erika Maquiling … Deze Kong & Yasuo Yoshikuni Project: “ Development of a multiplex genomic integration system for the selection of …
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Accelerating Metagenomics Discoveries with Deep Learning
… rather than single cells or isolated strains, is easy to generate, but difficult to assemble and interpret. The … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms organized into multiple interconnected layers. The architecture of these …
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JGI Workshops at 33rd Fungal Genetics Conference
… Wednesday, March 18: "Genomics of Environmental Opportunism: Fungal Adaptation at the Edge of Pathogenicity" Workshop Steven Ahrendt presenting  …
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2024 Progress Report
… for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … A record number of primary users — 2,475 — had active proposals with us, … use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 …
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