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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the Florida … U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub … impact the regulation of global nutrient cycles. The JGI’s latest strategic plan (download a copy  here ) … contribute toward developing the bioeconomy. Now, JGI researchers are lending their expertise in developing …
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A Plant Root Atlas for Tracking Developmental Trajectories
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … on single-cell and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader … perspective:  “ This exciting work is well aligned with the JGI’s growing efforts in establishing plant and fungal …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) … user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the … user facilities located at Berkeley Lab, including the JGI, the National Energy Research Scientific Computing …
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The Power of One, Amplified
… as high as 80°C (~190°F), yet microbes thrive here. The communities in this extreme environment are often less … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … was performed by Danielle Goudeau and Rex Malmstrom of the JGI’s Microscale Applications group . Cells were randomly …
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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Accelerating Metagenomics Discoveries with Deep Learning
… the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … such as  Mash and  BBsketch , whose lead developer is JGI software developer Brian Bushnell, no alignment-free … order to vectorize protein sequences. Sevim is part of the JGI Genome R&D Group and is one of more than 100 scientists …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … are even less known than DNA viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as … on mining prokaryotic viruses together, learned from JGI’s Nikos Kyrpides that his Microbiome Data Science group …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The microorganisms …
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Ian Blaby
… biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory … … Editorial Board member of Biology and Synthetic Biology JGI Co-chair, People Stewardship committee (2020-2022) UCLA …
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Help from Citrus’ Bitter, Hardier Cousin
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors of the  recent study … yet sweet are its genetic secrets. This work builds upon JGI-supported research led by Gmitter and JGI’s Daniel …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … relative of the candidate bioenergy crop switchgrass and a JGI Flagship Plant. All three  Brachypodium  grasses have … a Pan-genomic Context For the study, partly enabled by the JGI’s  Community Science Program , the team generated …
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